diff --git a/modules/mol/alg/pymod/lddt.py b/modules/mol/alg/pymod/lddt.py index 0f464d02bd28a330473191472c44275df9cc0263..ff6119a53c9f9052296e339de458223a29ba505a 100644 --- a/modules/mol/alg/pymod/lddt.py +++ b/modules/mol/alg/pymod/lddt.py @@ -403,7 +403,11 @@ class lDDTScorer: :param model: Model to be scored - models are preferably scored upon performing stereo-chemistry checks in order to punish for non-sensical irregularities. This must be done separately - as a pre-processing step. + as a pre-processing step. Target contacts that are not + covered by *model* are considered not conserved, thus + decreasing lDDT score. This also includes missing model + chains or model chains for which no mapping is provided in + *chain_mapping*. :type model: :class:`ost.mol.EntityHandle`/:class:`ost.mol.EntityView` :param thresholds: Thresholds of distance differences to be considered as correct - see docs in constructor for more info.