diff --git a/modules/mol/alg/pymod/chain_mapping.py b/modules/mol/alg/pymod/chain_mapping.py index 69d0150fd3827f3b0cbf63a7ac124fb3dd178670..832f01ec019d636afb675bafd1c629bd3aeb3e23 100644 --- a/modules/mol/alg/pymod/chain_mapping.py +++ b/modules/mol/alg/pymod/chain_mapping.py @@ -1078,7 +1078,7 @@ class ChainMapper: mapping, alns, opt_score = opt_qsscore) def GetRMSDMapping(self, model, strategy = "heuristic", subsampling=50, - chem_mapping_result = None, heuristic_n_max_naive = 24): + chem_mapping_result = None, heuristic_n_max_naive = 120): """Identify chain mapping based on minimal RMSD superposition Superposition and scoring is based on CA/C3' positions which are present @@ -1100,9 +1100,9 @@ class ChainMapper: transformation gets updated with each added chain pair. * **heuristic**: Uses *naive* strategy if number of possible mappings - is within *heuristic_n_max_naive*. The default of 24 corresponds - to a tetramer (4!=24). If the number of possible mappings is larger, - *greedy_iterative* is used. + is within *heuristic_n_max_naive*. The default of 120 corresponds + to a homo-pentamer (5!=120). If the number of possible mappings is + larger, *greedy_iterative* is used. :param model: Model to map :type model: :class:`ost.mol.EntityView`/:class:`ost.mol.EntityHandle`