From e2b3a00100ebc52f29458d8fb24e817936ee16a7 Mon Sep 17 00:00:00 2001
From: marco <marco@5a81b35b-ba03-0410-adc8-b2c5c5119f08>
Date: Mon, 10 May 2010 05:39:01 +0000
Subject: [PATCH] fix alignment/sequence unit tests
git-svn-id: https://dng.biozentrum.unibas.ch/svn/openstructure/trunk@2219 5a81b35b-ba03-0410-adc8-b2c5c5119f08
---
modules/seq/base/src/impl/sequence_impl.cc | 2 +-
modules/seq/base/tests/test_alignment.cc | 6 +++---
2 files changed, 4 insertions(+), 4 deletions(-)
diff --git a/modules/seq/base/src/impl/sequence_impl.cc b/modules/seq/base/src/impl/sequence_impl.cc
index c90e71c89..1572cd508 100644
--- a/modules/seq/base/src/impl/sequence_impl.cc
+++ b/modules/seq/base/src/impl/sequence_impl.cc
@@ -170,7 +170,7 @@ int SequenceImpl::GetLength() const {
char SequenceImpl::GetOneLetterCode(int position) const
{
- if (position<0 || position>static_cast<int>(seq_string_.length()))
+ if (position<0 || position>=static_cast<int>(seq_string_.length()))
throw Error("Position is not covered in sequence");
return seq_string_[position];
}
diff --git a/modules/seq/base/tests/test_alignment.cc b/modules/seq/base/tests/test_alignment.cc
index 97ffe338c..f8fef7fb6 100644
--- a/modules/seq/base/tests/test_alignment.cc
+++ b/modules/seq/base/tests/test_alignment.cc
@@ -215,9 +215,9 @@ BOOST_AUTO_TEST_CASE(alignment_aligned_region)
BOOST_CHECK_THROW(ar = a.MakeRegion(-1,2,0),std::out_of_range);
BOOST_CHECK_THROW(ar = a.MakeRegion(0,7,0),std::out_of_range);
- BOOST_CHECK_THROW(ar = a.MakeRegion(2,4,0),std::out_of_range);
- BOOST_CHECK_THROW(ar = a.MakeRegion(3,2,0),std::out_of_range);
- BOOST_CHECK_THROW(ar = a.MakeRegion(3,3,0),std::out_of_range);
+ BOOST_CHECK_NO_THROW(ar = a.MakeRegion(2,4,0));
+ BOOST_CHECK_NO_THROW(ar = a.MakeRegion(3,2,0));
+ BOOST_CHECK_NO_THROW(ar = a.MakeRegion(3,3,0));
}
BOOST_AUTO_TEST_SUITE_END()
--
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