# these are the different stages for our pipelines # jobs in the same stage run in parallel # next stage doesn't start until previous stage finishes with 'OK' # by now we only do build and test, we could add another stage "deploy" if # needed stages: - test # CentOS7 STAGE test:centos7.3: stage: test image: centos:7.3.1611 before_script: - echo "Running centos7.3 'before_script'..." - yum -y -q -e 0 install tcl - yum -y -q -e 0 install glibc-common - yum -y -q -e 0 install glibc-devel - yum -y -q -e 0 install make - yum -y -q -e 0 install libicu - yum -y -q -e 0 install libjpeg-turbo - yum -y -q -e 0 install mesa-libGL-devel - yum -y -q -e 0 install mesa-libGLU-devel - yum -y -q -e 0 install freetype - yum -y -q -e 0 install libpng - mkdir -p /scicore/soft/modules - ln -s /export/soft/apps/centos7/generic /scicore/soft/apps - ln -s /export/soft/modules/centos7/generic/all /scicore/soft/modules - source /export/soft/lua_lmod/centos7/lmod/lmod/init/bash - module use /scicore/soft/modules/all - module load CMake/3.4.3-goolf-1.7.20 - module load Python/2.7.11-goolf-1.7.20 - module load OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0 - module load Eigen/3.2.8-goolf-1.7.20 - module load numpy/1.10.1-goolf-1.7.20-Python-2.7.11 - module load Boost/1.53.0-goolf-1.7.20-Python-2.7.11 - module load Qt5/5.9.3-goolf-1.7.20 - module load LibTIFF/.4.0.4-goolf-1.7.20 - module load Perl/5.22.2-goolf-1.7.20 - module load HH-suite/2.0.16-goolf-1.7.20-Boost-1.53.0-Python-2.7.11 - module load OpenMM/6.1-goolf-1.7.20-Python-2.7.11 - module load SQLite/3.9.2-goolf-1.7.20 - echo "... done running centos7.3 'before_script'." script: - echo "Testing on CentOS 7..." - echo " Building OST..." - mkdir build-ci - cd build-ci - cmake .. -DENABLE_MM=1 -DOPEN_MM_LIBRARY=$EBROOTOPENMM/lib/libOpenMM.so -DOPEN_MM_PLUGIN_DIR=$EBROOTOPENMM/lib/plugins -DOPEN_MM_INCLUDE_DIR=$EBROOTOPENMM/include -DCOMPILE_TMTOOLS=1 -DENABLE_GFX=ON -DENABLE_GUI=OFF -DUSE_NUMPY=1 -DUSE_RPATH=1 -DPYTHON_ROOT=$EBROOTPYTHON -DEIGEN3_INCLUDE_DIR=$EBROOTEIGEN/include -DFFTW_LIBRARY=$EBROOTFFTW/lib/libfftw3f.a -DFFTW_INCLUDE_DIR=$EBROOTFFTW/include -DSQLITE3_LIBRARY=$EBROOTSQLITE/lib/libsqlite3.so -DSQLITE3_INCLUDE_DIR=$EBROOTSQLITE/include -DBOOST_ROOT=$EBROOTBOOST -DQT_QMAKE_EXECUTABLE=$EBROOTQT5/bin/qmake -DPNG_LIBRARY=$EBROOTLIBPNG/lib/libpng.so -DPNG_INCLUDE_DIR=$EBROOTLIBPNG/include -DPNG_PNG_INCLUDE_DIR=$EBROOTLIBPNG/include -DZLIB_LIBRARY=$EBROOTZLIB/lib/libz.so -DZLIB_INCLUDE_DIR=$EBROOTZLIB/include -DTIFF_INCLUDE_DIR=$EBROOTLIBTIFF/include -DTIFF_LIBRARY=$EBROOTLIBTIFF/lib/libtiff.so -DOPTIMIZE=1 -DCMAKE_C_FLAGS='-L/scicore/soft/apps/LibTIFF/4.0.4-goolf-1.7.20/lib/ -L/scicore/soft/apps/libpng/1.6.18-goolf-1.7.20/lib/ -L/scicore/soft/apps/Boost/1.53.0-goolf-1.7.20-Python-2.7.11/lib/ -L/scicore/soft/apps/Qt5/5.9.3-goolf-1.7.20/lib/ -Wno-unused-local-typedefs' -DCMAKE_CXX_FLAGS='-L/scicore/soft/apps/LibTIFF/4.0.4-goolf-1.7.20/lib/ -L/scicore/soft/apps/libpng/1.6.18-goolf-1.7.20/lib/ -L/scicore/soft/apps/Boost/1.53.0-goolf-1.7.20-Python-2.7.11/lib/ -L/scicore/soft/apps/Qt5/5.9.3-goolf-1.7.20/lib/ -Wno-unused-local-typedefs' - make -j 2 - echo " ... done building OST." - echo " Running unit tests for OST..." - make check - echo " ... done running unit tests for OST..." - echo "... done testing on CentOS 7."