meld01.stdout 1.08 KB
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ProMod3: ======================================================================
ProMod3: Version 2.0.0
ProMod3: module-path /scicore/web/swissmodel/smng-beta/GT/ProMod3/build/stage/lib64/python2.7/site-packages/promod3/__init__.pyc
ProMod3: share-path /scicore/web/swissmodel/smng-beta/GT/ProMod3/build/stage/share/promod3
ProMod3: Starting modelling based on a raw model.
ProMod3: Removed 1 terminal gap(s).
ProMod3: Trying to close small deletions (no. of gap(s): 1).
ProMod3: Initialized default backbone scoring for modelling.
ProMod3: Trying to fill 1 gap(s) by database.
ProMod3: Resolved A.HIS38-(DVV)-A.GLY42 by filling A.GLN34-(EIYHDVV)-A.GLY42 (83 candidates, BB_DB)
ProMod3: Rebuilding sidechains.
ProMod3: Minimize energy.
ProMod3: Perform energy minimization (iteration 1, energy: 1.18274e+18)
ProMod3: Perform energy minimization (iteration 2, energy: 1220.89)
ProMod3: No more stereo-chemical problems -> final energy: 607.857
ProMod3: ======================================================================
ranked models with QMEAN (top-1)
   1 4b8v.1.A (1f7ee0) pred=0.647, qmn=0.720, c=0.810