From 0d35e6e163dba066e5aff30a93f6a7acad184a83 Mon Sep 17 00:00:00 2001
From: Iris Mestres Pascual <iris.mestrespascual@unibas.ch>
Date: Tue, 17 Jan 2023 17:25:10 +0000
Subject: [PATCH] Delete config_quantify.yaml

---
 test/config_quantify.yaml | 23 -----------------------
 1 file changed, 23 deletions(-)
 delete mode 100644 test/config_quantify.yaml

diff --git a/test/config_quantify.yaml b/test/config_quantify.yaml
deleted file mode 100644
index 691cedf..0000000
--- a/test/config_quantify.yaml
+++ /dev/null
@@ -1,23 +0,0 @@
----
-#### GLOBAL PARAMETERS ####
-
-# Directories
-# Usually there is no need to change these
-output_dir: "results"
-scripts_dir: "../scripts"
-local_log: "logs/local"
-cluster_log: "logs/cluster"
-
-# Types of miRNAs to quantify
-#mir_list: ["miRNA", "miRNA_primary_transcript", "isomirs"]
-mir_list: ["miRNA", "miRNA_primary_transcript"]
-
-# Resources: miR annotations, chromosome name mappings
-# All of these are produced by the "prepare" workflow
-mirnas_anno: "results/homo_sapiens/chrY/mirna_filtered.bed"
-isomirs_anno: "results/homo_sapiens/chrY/isomirs_annotation.bed"
-
-# Inputs information
-input_dir: "results"
-sample: ["test_lib"]  # put all samples, separated by comma
-...
-- 
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