From c0fb8ae15f574ac56b3ad22cffb39bbbc07fc837 Mon Sep 17 00:00:00 2001
From: Alex Kanitz <alexander.kanitz@alumni.ethz.ch>
Date: Tue, 28 Jun 2022 01:16:11 +0200
Subject: [PATCH] docs: depreciation notice

---
 README.md | 7 +++++++
 1 file changed, 7 insertions(+)

diff --git a/README.md b/README.md
index 5f75c34..9e618ce 100644
--- a/README.md
+++ b/README.md
@@ -1,5 +1,12 @@
 # mir-prepare-annotation
 
+**NOTE: THIS IS AN OUTDATED VERSION OF THE ZAVOLAB MIRNA PIPELINE SUITE, IN
+WHICH EACH PIPELINE LIVES INSIDE ITS OWN REPOSITORY. GIVEN THAT THE PIPELINES
+ARE USUALLY RUN TOGETHER AND THEY SHARE A LOT OF THE SAME RESOURCES, WE HAVE
+SINCE DECIDED TO HOST ALL PIPELINES IN THE SAME (THIS!) REPOSITORY, UNDER THE
+DEFAULT BRANCH. YOU ARE STRONGLY RECOMMENDED TO USE THE NEW SETUP, AS THIS
+BRANCH AND THE OTHER REPOSITORIES ARE NOT MAINTAINED ANYMORE.**
+
 [Snakemake][snakemake] workflow to download and prepare the necessary files for
 smallRNA-seq related pipelines [mir-map][mir-map] and [mir-quant][mir-quant].
 
-- 
GitLab