diff --git a/images/workflow_dag_quantify.svg b/images/workflow_dag_quantify.svg deleted file mode 100644 index 841bac1f6e67b9e63b87eb902ef722f8443c4544..0000000000000000000000000000000000000000 --- a/images/workflow_dag_quantify.svg +++ /dev/null @@ -1,228 +0,0 @@ -<?xml version="1.0" encoding="UTF-8" standalone="no"?> -<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN" - "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd"> -<!-- Generated by graphviz version 2.40.1 (20161225.0304) - --> -<!-- Title: snakemake_dag Pages: 1 --> -<svg width="410pt" height="404pt" - viewBox="0.00 0.00 410.00 404.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink"> -<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 400)"> -<title>snakemake_dag</title> -<polygon fill="#ffffff" stroke="transparent" points="-4,4 -4,-400 406,-400 406,4 -4,4"/> -<!-- 0 --> -<g id="node1" class="node"> -<title>0</title> -<path fill="none" stroke="#d85656" stroke-width="2" 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stroke="#c0c0c0" stroke-width="2" points="289.624,-111.1955 298.424,-105.2954 287.8654,-104.42 289.624,-111.1955"/> -</g> -<!-- 3 --> -<g id="node4" class="node"> -<title>3</title> -<path fill="none" stroke="#d8a456" stroke-width="2" stroke-dasharray="5,2" d="M148.5,-252C148.5,-252 79.5,-252 79.5,-252 73.5,-252 67.5,-246 67.5,-240 67.5,-240 67.5,-228 67.5,-228 67.5,-222 73.5,-216 79.5,-216 79.5,-216 148.5,-216 148.5,-216 154.5,-216 160.5,-222 160.5,-228 160.5,-228 160.5,-240 160.5,-240 160.5,-246 154.5,-252 148.5,-252"/> -<text text-anchor="middle" x="114" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">intersect_mirna</text> -</g> -<!-- 3->2 --> -<g id="edge8" class="edge"> -<title>3->2</title> -<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M95.0743,-215.8314C86.0143,-207.1337 75.0191,-196.5783 65.1735,-187.1265"/> -<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="67.5574,-184.5633 57.9196,-180.1628 62.7096,-189.613 67.5574,-184.5633"/> -</g> 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d="M149.5,-324C149.5,-324 78.5,-324 78.5,-324 72.5,-324 66.5,-318 66.5,-312 66.5,-312 66.5,-300 66.5,-300 66.5,-294 72.5,-288 78.5,-288 78.5,-288 149.5,-288 149.5,-288 155.5,-288 161.5,-294 161.5,-300 161.5,-300 161.5,-312 161.5,-312 161.5,-318 155.5,-324 149.5,-324"/> -<text text-anchor="middle" x="114" y="-303.5" font-family="sans" font-size="10.00" fill="#000000">sort_alignments</text> -</g> -<!-- 4->3 --> -<g id="edge9" class="edge"> -<title>4->3</title> -<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M114,-287.8314C114,-280.131 114,-270.9743 114,-262.4166"/> -<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="117.5001,-262.4132 114,-252.4133 110.5001,-262.4133 117.5001,-262.4132"/> -</g> -<!-- 5 --> -<g id="node6" class="node"> -<title>5</title> -<path fill="none" stroke="#78d856" stroke-width="2" stroke-dasharray="5,2" d="M149.5,-396C149.5,-396 78.5,-396 78.5,-396 72.5,-396 66.5,-390 66.5,-384 66.5,-384 66.5,-372 66.5,-372 66.5,-366 72.5,-360 78.5,-360 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75.2081,-108.1628 80.926,-117.0822 85.2402,-111.5697"/> -</g> -<!-- 6->11 --> -<g id="edge16" class="edge"> -<title>6->11</title> -<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M157.1218,-143.8314C163.0499,-135.6232 170.1729,-125.7606 176.6933,-116.7323"/> -<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="179.684,-118.5693 182.7015,-108.4133 174.0092,-114.4708 179.684,-118.5693"/> -</g> -<!-- 6->12 --> -<g id="edge20" class="edge"> -<title>6->12</title> -<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M192.198,-144.2946C221.5518,-133.5116 259.0246,-119.7461 288.8932,-108.7739"/> -<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="290.1239,-112.0506 298.3037,-105.317 287.7101,-105.4799 290.1239,-112.0506"/> -</g> -<!-- 7 --> -<g id="node8" class="node"> -<title>7</title> -<path fill="none" stroke="#56a2d8" stroke-width="2" stroke-dasharray="5,2" d="M276,-180C276,-180 222,-180 222,-180 216,-180 210,-174 210,-168 210,-168 210,-156 210,-156 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218.3011,-114.3918"/> -</g> -<!-- 7->12 --> -<g id="edge21" class="edge"> -<title>7->12</title> -<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M271.9631,-143.8314C283.1715,-134.9632 296.8209,-124.1637 308.9439,-114.5718"/> -<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="311.3737,-117.1125 317.0442,-108.1628 307.0303,-111.6229 311.3737,-117.1125"/> -</g> -<!-- 8 --> -<g id="node9" class="node"> -<title>8</title> -<path fill="none" stroke="#d8a456" stroke-width="2" stroke-dasharray="5,2" d="M312.5,-252C312.5,-252 243.5,-252 243.5,-252 237.5,-252 231.5,-246 231.5,-240 231.5,-240 231.5,-228 231.5,-228 231.5,-222 237.5,-216 243.5,-216 243.5,-216 312.5,-216 312.5,-216 318.5,-216 324.5,-222 324.5,-228 324.5,-228 324.5,-240 324.5,-240 324.5,-246 318.5,-252 312.5,-252"/> -<text text-anchor="middle" x="278" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">intersect_mirna</text> -</g> -<!-- 8->7 --> -<g id="edge12" class="edge"> -<title>8->7</title> -<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M270.6821,-215.8314C267.5124,-207.9617 263.73,-198.5712 260.2187,-189.8533"/> -<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="263.3992,-188.3815 256.4165,-180.4133 256.9061,-190.9968 263.3992,-188.3815"/> -</g> -<!-- 10 --> -<g id="node11" class="node"> -<title>10</title> -<path fill="none" stroke="#c6d856" stroke-width="2" stroke-dasharray="5,2" d="M390,-180C390,-180 318,-180 318,-180 312,-180 306,-174 306,-168 306,-168 306,-156 306,-156 306,-150 312,-144 318,-144 318,-144 390,-144 390,-144 396,-144 402,-150 402,-156 402,-156 402,-168 402,-168 402,-174 396,-180 390,-180"/> -<text text-anchor="middle" x="354" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">quant_mirna_pri</text> -</g> -<!-- 8->10 --> -<g id="edge14" class="edge"> -<title>8->10</title> -<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M297.178,-215.8314C306.3588,-207.1337 317.5006,-196.5783 327.4776,-187.1265"/> -<polygon 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d="M350.4672,-143.8314C348.9699,-136.131 347.1895,-126.9743 345.5255,-118.4166"/> -<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="348.9248,-117.5614 343.5804,-108.4133 342.0535,-118.8975 348.9248,-117.5614"/> -</g> -<!-- 11->0 --> -<g id="edge2" class="edge"> -<title>11->0</title> -<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M196,-71.8314C196,-64.131 196,-54.9743 196,-46.4166"/> -<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="199.5001,-46.4132 196,-36.4133 192.5001,-46.4133 199.5001,-46.4132"/> -</g> -<!-- 12->0 --> -<g id="edge3" class="edge"> -<title>12->0</title> -<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M303.6627,-71.8314C281.7917,-60.8959 254.0472,-47.0236 232.2008,-36.1004"/> -<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="233.743,-32.9584 223.2334,-31.6167 230.6124,-39.2194 233.743,-32.9584"/> -</g> -</g> -</svg>