diff --git a/.gitignore b/.gitignore
index cc96521cbaed96fd151fdb9dae332b3f61dc1fb8..d425535128bc1018d1e7a2b18805f876baa266bf 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,8 +1,3 @@
 snakemake/annotation/
-snakemake/prepare_annotation/results/
-snakemake/prepare_annotation/results/*
-snakemake/process_data/.snakemake
-snakemake/process_data/results/local_log
-snakemake/process_data/results/cluster_log
 .DS_Store
 ._.DS_Store