{ "__default__" : { "queue": "6hours", "time": "05:00:00", "threads": "1", "mem": "4G", "name": "{rule}.{wildcards}", "out": "$PWD/logs/cluster_log/{rule}.{wildcards}-%j-%N.out" }, "map_to_other_genes": { "time": "06:00:00", "threads":"8", "mem":"50G" }, "map_to_transcripts": { "time": "06:00:00", "threads":"8", "mem":"50G" }, "sam2bam_sort_and_index": { "time": "06:00:00", "threads":"1", "mem":"10G" } }