diff --git a/src/RIblast_process3.nf b/src/RIblast_process3.nf deleted file mode 100644 index eb35b4cdb1fdf4d208af6f5fa8dc694bb532c274..0000000000000000000000000000000000000000 --- a/src/RIblast_process3.nf +++ /dev/null @@ -1,26 +0,0 @@ -#!/usr/bin/env nextflow - -params.transcripts = "$baseDir/Docker-Files/transcript2.fasta" -params.primers = "$baseDir/Docker-Files/primer.fasta" - -log.info """\ - R I B L A S T P I P E L I N E - =================================== - transcripts: ${params.transcripts} - primers : ${params.primers} - """ - .stripIndent() - -process RIblast_interaction { - - input: - path transcript from params.transcripts - path primer from params.primers - - script: - """ - RIblast db -i $transcript -o /RIblast/test_db - RIblast ris -i $primer -o /RIblast/Energies.txt -d /RIblast/test_db - """ -} -