From 0c46921b5e19ba2954567abcef5771d0c0f852da Mon Sep 17 00:00:00 2001
From: Melvin Alappat <melvin.alappat@unibas.ch>
Date: Thu, 30 Dec 2021 12:23:22 +0100
Subject: [PATCH] deleting old nextflow process
---
src/RIblast_process3.nf | 26 --------------------------
1 file changed, 26 deletions(-)
delete mode 100644 src/RIblast_process3.nf
diff --git a/src/RIblast_process3.nf b/src/RIblast_process3.nf
deleted file mode 100644
index eb35b4c..0000000
--- a/src/RIblast_process3.nf
+++ /dev/null
@@ -1,26 +0,0 @@
-#!/usr/bin/env nextflow
-
-params.transcripts = "$baseDir/Docker-Files/transcript2.fasta"
-params.primers = "$baseDir/Docker-Files/primer.fasta"
-
-log.info """\
- R I B L A S T P I P E L I N E
- ===================================
- transcripts: ${params.transcripts}
- primers : ${params.primers}
- """
- .stripIndent()
-
-process RIblast_interaction {
-
- input:
- path transcript from params.transcripts
- path primer from params.primers
-
- script:
- """
- RIblast db -i $transcript -o /RIblast/test_db
- RIblast ris -i $primer -o /RIblast/Energies.txt -d /RIblast/test_db
- """
-}
-
--
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