From 75735c39a926f272d7077b4546f727d66da317b3 Mon Sep 17 00:00:00 2001 From: Melvin Alappat <melvin.alappat@unibas.ch> Date: Wed, 8 Dec 2021 10:32:57 +0100 Subject: [PATCH] feat: adding code for Issue_4 --- src/PrimingProb_Final.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/PrimingProb_Final.py b/src/PrimingProb_Final.py index a1adb8c..eadb3df 100644 --- a/src/PrimingProb_Final.py +++ b/src/PrimingProb_Final.py @@ -60,7 +60,7 @@ class Probability: gff (file): Gff file contains all the output information """ # count interactions per script through fasta ID (first line of fasta) - mycounter = open("./Docker-Files/transcript.fasta", "r") + mycounter = open("../inputs/transcript.fasta", "r") mycounter_list = [] @@ -157,7 +157,7 @@ class Probability: final_list.append(para_list[ss]) del para_list[0:counter_list[bb]] - gff = open("./output/Potential_Priming_sites.txt", "w+") # gff file + gff = open("../inputs/Potential_Priming_sites.txt", "w+") # gff file for ll in range(0, len(final_list)): gff.write(str(final_list[ll][0]) + -- GitLab