diff --git a/src/generate_transcripts.nf b/src/generate_transcripts.nf index 36b1f6792a3d1131cf668649d7f8347f03e66a5a..cf107c5751169048026f968b2232fdf7d4bdc512 100644 --- a/src/generate_transcripts.nf +++ b/src/generate_transcripts.nf @@ -1,8 +1,8 @@ #!/usr/bin/env nextflow -params.fasta = "/inputs/ref_genome.fa" -params.gtf = "/inputs/ref_annotation.gtf" -params.outdir = "/tests" +params.fasta = "/builds/zavolan_group/pipelines/scrna-seq-simulation/inputs/ref_genome.fa" +params.gtf = "/builds/zavolan_group/pipelines/scrna-seq-simulation/inputs/ref_annotation.gtf" +params.outdir = "/builds/zavolan_group/pipelines/scrna-seq-simulation/tests" params.tail_length = "100" params.weights = "1.0 0.0 0.0 0.0"