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zavolan_group
pipelines
scRNA-seq-simulation
Issues
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18
Closed
10
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28
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Title
Issue
Sample transcript counts given average expression levels
#28
·
created
2 years ago
by
MihaelaZavolan
Linked to other repo
updated 2 years ago
Issue
Inferring the code of internal priming by deep learning
#21
·
created
3 years ago
by
MihaelaZavolan
Linked to other repo
updated 2 years ago
Issue
Workflow for computing per-intron inclusion rates from bulk RNA-seq
#20
·
created
3 years ago
by
MihaelaZavolan
updated 2 years ago
Issue
Nextflow code for read-to-genome alignment
0 of 3 checklist items completed
#19
·
created
3 years ago
by
MihaelaZavolan
updated 2 years ago
Issue
Workflow for generating synthetic data
#18
·
created
3 years ago
by
MihaelaZavolan
updated 1 year ago
Issue
Analysis of internal priming sites
#16
·
created
3 years ago
by
MihaelaZavolan
Linked to other repo
updated 2 years ago
Issue
Evaluate the dependency of gene expression estimates on experimental parameters
#15
·
created
3 years ago
by
MihaelaZavolan
Issue
Distribution of reads counts for a given gene across cells
#14
·
created
3 years ago
by
MihaelaZavolan
updated 2 years ago
Issue
Estimating the accuracy of gene expression estimates
#13
·
created
3 years ago
by
MihaelaZavolan
updated 2 years ago
Issue
Construct the mean-variance function for all genes
#12
·
created
3 years ago
by
MihaelaZavolan
updated 2 years ago
Issue
Quantifying gene expression
#11
·
created
3 years ago
by
MihaelaZavolan
updated 2 years ago
Issue
Read sequencing
#7
·
created
3 years ago
by
MihaelaZavolan
Linked to other repo
updated 2 years ago
Issue
Terminal fragment selection
#6
·
created
3 years ago
by
MihaelaZavolan
Linked to other repo
1
updated 2 years ago
Issue
Generate cDNAs
#5
·
created
3 years ago
by
MihaelaZavolan
Linked to other repo
updated 2 years ago
Issue
Predicting priming sites within transcripts
#4
·
created
3 years ago
by
MihaelaZavolan
Linked to other repo
updated 2 years ago
Issue
Extract transcript sequences
#3
·
created
3 years ago
by
MihaelaZavolan
In progress
Linked to other repo
updated 1 year ago
Issue
Generate transcript structures
#2
·
created
3 years ago
by
MihaelaZavolan
In progress
Linked to other repo
updated 2 months ago
Issue
Sample expressed transcripts
#1
·
created
3 years ago
by
MihaelaZavolan
In progress
Linked to other repo
updated 2 months ago
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