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and are therefore not required in the rules. - Snakefile star_rpm: --outWigNorm (default RPM was used) star_rpm: --outWigStrand (default Stranded was used) rename_star_rpm_for_alfa: orientation in params is redundant (Fixes #152) - single_end.snakefile.smk map_genome_star: outFilterMismatchNoverLmax map_genome_star: outFilterScoreMinOverLread map_genome_star: outFilterMatchNminOverLread quantification_salmon: --writeUnmappedNames - paired_end.snakefile.smk pe_map_genome_star: outFilterMismatchNoverLmax pe_map_genome_star: outFilterScoreMinOverLread pe_map_genome_star: outFilterMatchNminOverLread quantification_salmon: --writeUnmappedNames
and are therefore not required in the rules. - Snakefile star_rpm: --outWigNorm (default RPM was used) star_rpm: --outWigStrand (default Stranded was used) rename_star_rpm_for_alfa: orientation in params is redundant (Fixes #152) - single_end.snakefile.smk map_genome_star: outFilterMismatchNoverLmax map_genome_star: outFilterScoreMinOverLread map_genome_star: outFilterMatchNminOverLread quantification_salmon: --writeUnmappedNames - paired_end.snakefile.smk pe_map_genome_star: outFilterMismatchNoverLmax pe_map_genome_star: outFilterScoreMinOverLread pe_map_genome_star: outFilterMatchNminOverLread quantification_salmon: --writeUnmappedNames