From 34622aa1ad5500dec43e71d5daa71ae201d5af64 Mon Sep 17 00:00:00 2001
From: burri0000 <dominik.burri@unibas.ch>
Date: Wed, 14 Jul 2021 13:46:37 +0200
Subject: [PATCH] properly raise TypeError and rephrase error message.
---
workflow/Snakefile | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/workflow/Snakefile b/workflow/Snakefile
index 15faefd..e55a954 100644
--- a/workflow/Snakefile
+++ b/workflow/Snakefile
@@ -57,7 +57,8 @@ try:
rule_config = yaml.safe_load(_file)
logger.info(f"Loaded rule_config from {config['optional']['rule_config']}.")
except TypeError:
- logger.error(f'No string supplied at field "rule_config", but: {config["optional"]["rule_config"]}')
+ logger.error(f'No string supplied at field "rule_config", but: {type(config["optional"]["rule_config"])} with content: {config["optional"]["rule_config"]}')
+ raise
except FileNotFoundError:
logger.error(f"No rule config file found at {config['optional']['rule_config']}. Either provide file or remove rule_config parameter from config.yaml! ")
raise
--
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