From 8e92f9b87aa833c52cedca02080ef4e004dd193e Mon Sep 17 00:00:00 2001 From: Alex Kanitz <alexander.kanitz@unibas.ch> Date: Fri, 24 Jan 2020 15:22:25 +0100 Subject: [PATCH] Update README.md --- scripts/README.md | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/scripts/README.md b/scripts/README.md index 389c8b7..0548833 100644 --- a/scripts/README.md +++ b/scripts/README.md @@ -2,6 +2,7 @@ In order to connect to the LabKey through API, you will first need to create a f ```bash touch ${HOME}/.netrc +``` Add the following lines to the file: @@ -35,4 +36,5 @@ Example: python labkey_api.py TEST_ABOERSCH RNA_Seq_data_template ``` -The script outputs the requested LabKey table in the form of a pandas data frame. +Right now the script prints a representation of a `pandas` data frame containing the requested LabKey table the the screen. +For further processing the current script could be included in another script, or it could be modified to write out the data in a desired file format (e.g., TSV). \ No newline at end of file -- GitLab