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Commit d4a37587 authored by BIOPZ-Gypas Foivos's avatar BIOPZ-Gypas Foivos
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Add biocontainers image for tin-score-calculation

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...@@ -698,10 +698,10 @@ rule calculate_TIN_scores: ...@@ -698,10 +698,10 @@ rule calculate_TIN_scores:
threads: 8 threads: 8
singularity: singularity:
"docker://zavolab/tin_score_calculation:0.2.0-slim" "docker://quay.io/biocontainers/tin-score-calculation:0.4--pyh5e36f6f_0"
shell: shell:
"(tin_score_calculation.py \ "(calculate-tin.py \
-i {input.bam} \ -i {input.bam} \
-r {input.transcripts_bed12} \ -r {input.transcripts_bed12} \
--names {params.sample} \ --names {params.sample} \
......
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