From dda19b4c9a4770c494a024e2f3c2a9cccb832745 Mon Sep 17 00:00:00 2001
From: BIOPZ-Iborra de Toledo Paula <paula.iborradetoledo@unibas.ch>
Date: Tue, 23 Jun 2020 11:05:00 +0200
Subject: [PATCH] Update table of contents pipeline_documentation.md
---
pipeline_documentation.md | 4 +++-
1 file changed, 3 insertions(+), 1 deletion(-)
diff --git a/pipeline_documentation.md b/pipeline_documentation.md
index 4adb2fa..e9b582a 100644
--- a/pipeline_documentation.md
+++ b/pipeline_documentation.md
@@ -30,6 +30,8 @@ on installation and usage please see [here](README.md).
- [**plot_TIN_scores**](#plot_tin_scores)
- [**salmon_quantmerge_genes**](#salmon_quantmerge_genes)
- [**salmon_quantmerge_transcripts**](#salmon_quantmerge_transcripts)
+ - [**kallisto_merge_genes**](#kallisto_merge_genes)
+ - [**kallisto_merge_transcripts**](#kallisto_merge_transcripts)
- [**generate_alfa_index**](#generate_alfa_index)
- [**alfa_qc**](#alfa_qc)
- [**alfa_qc_all_samples**](#alfa_qc_all_samples)
@@ -37,7 +39,7 @@ on installation and usage please see [here](README.md).
- [**prepare_multiqc_config**](#prepare_multiqc_config)
- [**multiqc_report**](#multiqc_report)
- [**finish**](#finish)
- - [**Sequencing mode-specific**](#sequencing-mode-specific)
+ - [**Sequencing mode-specific**](#sequencing-mode-specific)
- [**remove_adapters_cutadapt**](#remove_adapters_cutadapt)
- [**remove_polya_cutadapt**](#remove_polya_cutadapt)
- [**map_genome_star**](#map_genome_star)
--
GitLab