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ZARP
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Title
add TIN score merge and plot steps
!43
· created
4 years ago
by
BIOPZ-Bak Maciej
master
Merged
2
updated
4 years ago
Alfa integration
!41
· created
4 years ago
by
Dominik Burri
v0.1.0 release
master
Merged
6
updated
4 years ago
Simplify star_rpm & index_genomic_alignment_samtools.
!38
· created
4 years ago
by
BIOPZ-Gypas Foivos
v0.1.0 release
master
Doing
Merged
1
updated
4 years ago
Normalised coverage
!35
· created
4 years ago
by
Dominik Burri
master
Merged
6
updated
4 years ago
Replace cufflinks image with gffread image
!37
· created
4 years ago
by
BIOPZ-Gypas Foivos
v0.1.0 release
master
Testing & CI/CD
Merged
updated
4 years ago
Transcriptome from genome and gene annotations
!36
· created
4 years ago
by
BIOPZ-Iborra de Toledo Paula
master
Merged
1
updated
4 years ago
Restructure pipeline
!34
· created
4 years ago
by
BIOPZ-Katsantoni Maria
v0.1.0 release
master
Merged
1
updated
4 years ago
Generate gene and transcript count tables from salmon
!33
· created
4 years ago
by
BIOPZ-Gypas Foivos
master
Merged
updated
4 years ago
Use minified docker images
!32
· created
4 years ago
by
Alex Kanitz
master
Merged
updated
4 years ago
Rule to collect all TPM values from Salmon added
!30
· created
4 years ago
by
BIOPZ-Iborra de Toledo Paula
master
Merged
updated
4 years ago
Handle polyA processing in input preparation script
!31
· created
4 years ago
by
BIOPZ-Katsantoni Maria
master
Merged
updated
4 years ago
create log directories in Snakefile
!28
· created
4 years ago
by
Alex Kanitz
master
Merged
updated
4 years ago
fix broken links in docs
!27
· created
4 years ago
by
Alex Kanitz
master
Merged
updated
4 years ago
install dependencies via Conda
!24
· created
4 years ago
by
Alex Kanitz
master
Merged
8
updated
4 years ago
run tests in verbose mode
!26
· created
4 years ago
by
Alex Kanitz
master
Merged
updated
4 years ago
TIN score calculation added
!25
· created
4 years ago
by
BIOPZ-Bak Maciej
master
Merged
updated
4 years ago
get Snakemake input from LabKey API
!23
· created
4 years ago
by
BIOPZ-Katsantoni Maria
master
Merged
updated
4 years ago
repo follows recommended structure
!22
· created
4 years ago
by
Alex Kanitz
master
Merged
updated
4 years ago
hot fix integration test script
!21
· created
4 years ago
by
Alex Kanitz
master
Merged
updated
4 years ago
LabKey-like input to Snakmake input
!20
· created
4 years ago
by
BIOPZ-Katsantoni Maria
master
Merged
updated
4 years ago
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