Merge requests · zavolan_group / pipelines / ZARP

TIN score calculation added

!25 · created Feb 17, 2020 by BIOPZ-Bak Maciej master
updated Feb 17, 2020
install dependencies via Conda

!24 · created Feb 16, 2020 by Alex Kanitz master
- Merged
- 8
updated Feb 18, 2020
get Snakemake input from LabKey API

!23 · created Feb 14, 2020 by BIOPZ-Katsantoni Maria master
- Merged
updated Feb 15, 2020
repo follows recommended structure

!22 · created Feb 14, 2020 by Alex Kanitz master
- Merged
updated Feb 14, 2020
hot fix integration test script

!21 · created Feb 14, 2020 by Alex Kanitz master
- Merged
updated Feb 14, 2020
LabKey-like input to Snakmake input

!20 · created Feb 14, 2020 by BIOPZ-Katsantoni Maria master
- Merged
updated Feb 14, 2020
Ground truth checks

!19 · created Feb 14, 2020 by Alex Kanitz master
- Merged
updated Feb 14, 2020
display rule graph instead of DAG

!18 · created Feb 14, 2020 by CJHerrmann master
updated Feb 14, 2020
update install instructions

!17 · created Feb 14, 2020 by CJHerrmann master
updated Feb 14, 2020
Replace test files with small synthetic ones

!16 · created Feb 09, 2020 by Alex Kanitz master
- Merged
- 1
updated Feb 09, 2020
Wire all available rules

!15 · created Feb 07, 2020 by BIOPZ-Iborra de Toledo Paula master
- Merged
- 1
updated Feb 08, 2020
Labkey input merge

!14 · created Feb 07, 2020 by BIOPZ-Börsch Anastasiya master
- Merged
updated Feb 07, 2020
fix various small issues

!13 · created Feb 07, 2020 by Alex Kanitz master
- Merged
updated Feb 07, 2020
add documentation

!12 · created Feb 04, 2020 by Alex Kanitz master
- Merged
- 1
updated Feb 04, 2020
clean up tests

!11 · created Feb 04, 2020 by Alex Kanitz master
- Merged
updated Feb 04, 2020
Input parser

!10 · created Jan 31, 2020 by BIOPZ-Katsantoni Maria master
updated Feb 04, 2020
Fix params.direcionality for kallisto rule

!9 · created Jan 24, 2020 by BIOPZ-Gypas Foivos master
- Merged
updated Jan 24, 2020
Labkey api

!8 · created Jan 24, 2020 by BIOPZ-Börsch Anastasiya master
updated Feb 04, 2020
Update fake samples file: tests/samples.tsv

!7 · created Jan 24, 2020 by BIOPZ-Gypas Foivos master
- Merged
- 3
updated Jan 27, 2020
added fastq testfiles

!6 · created Jan 10, 2020 by BIOPZ-Bak Maciej master
- Merged
- 1
updated Jan 10, 2020