sample	seqmode	fq1	index_size	kmer	fq2	fq1_3p	fq1_5p	fq2_3p	fq2_5p	organism	gtf	gtf_filtered	genome	tr_fasta_filtered	sd	mean	multimappers	soft_clip	pass_mode	libtype	kallisto_directionality	fq1_polya	fq2_polya
paired_end_R1_on_plus_sense	paired_end	XXXXXXXXXXXXX	75	31	XXXXXXXXXXXXX	GATCGGAAGAGCACA	XXXXXXXXXXXXX	AGATCGGAAGAGCGT	XXXXXXXXXXXXX	homo_sapiens	../input_files/homo_sapiens/quick_start.gtf	../input_files/homo_sapiens/quick_start.gtf	XXXXXXXXXXXXX	XXXXXXXXXXXXX	100	250	10	EndToEnd	None	A	--fr	AAAAAAAAAAAAAAAAA	TTTTTTTTTTTTTTTTT
paired_end_R1_on_plus_antisense	paired_end	XXXXXXXXXXXXX	75	31	XXXXXXXXXXXXX	AGATCGGAAGAGCACA	XXXXXXXXXXXXX	AGATCGGAAGAGCGT	XXXXXXXXXXXXX	homo_sapiens	../input_files/homo_sapiens/quick_start.gtf	../input_files/homo_sapiens/quick_start.gtf	XXXXXXXXXXXXX	XXXXXXXXXXXXX	100	250	10	EndToEnd	None	A	--rf	AAAAAAAAAAAAAAAAA	TTTTTTTTTTTTTTTTT
paired_end_R1_on_minus_sense	paired_end	XXXXXXXXXXXXX	75	31	XXXXXXXXXXXXX	AGATCGGAAGAGCACA	XXXXXXXXXXXXX	AGATCGGAAGAGCGT	XXXXXXXXXXXXX	homo_sapiens	../input_files/homo_sapiens/quick_start.gtf	../input_files/homo_sapiens/quick_start.gtf	XXXXXXXXXXXXX	XXXXXXXXXXXXX	100	250	10	EndToEnd	None	A	--fr	AAAAAAAAAAAAAAAAA	TTTTTTTTTTTTTTTTT
paired_end_R1_on_minus_antisense	paired_end	XXXXXXXXXXXXX	75	31	XXXXXXXXXXXXX	AGATCGGAAGAGCACA	XXXXXXXXXXXXX	AGATCGGAAGAGCGT	XXXXXXXXXXXXX	homo_sapiens	../input_files/homo_sapiens/quick_start.gtf	../input_files/homo_sapiens/quick_start.gtf	XXXXXXXXXXXXX	XXXXXXXXXXXXX	100	250	10	EndToEnd	None	A	--rf	AAAAAAAAAAAAAAAAA	TTTTTTTTTTTTTTTTT