--- samples: "../input_files/samples_alfa.tsv" output_dir: "results/" log_dir: "logs/" kallisto_indexes: "results/kallisto_indexes/" salmon_indexes: "results/salmon_indexes/" star_indexes: "results/star_indexes/" alfa_indexes: "results/alfa_indexes/" report_description: "No description provided by user" report_logo: "../../images/logo.128px.png" report_url: "https://zavolan.biozentrum.unibas.ch/" ...