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| 2019 | GEO2RNAseq - https://www.biorxiv.org/content/10.1101/771063v1 |
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| 2019 | Shiny-Seq - https://bmcresnotes.biomedcentral.com/articles/10.1186/s13104-019-4471-1 |
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| | https://github.com/nf-core/rnaseq |
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| | NGS-pipe - https://github.com/cbg-ethz/NGS-pipe/wiki | |