Update Project Design authored by Bastian Wagner's avatar Bastian Wagner
......@@ -15,7 +15,7 @@ Simulating cDNA synthesis This is done by reverse transcribing starting from the
- priming_sites = 220, 260, 390 \[...\]
- priming_probabilities = 0.33, 0.27, 0.40 \[...\]
2. Generate a list of unique_transcripts based on transcript_sequences + priming_sites and add the list to the FASTA output file. mRNA -> cDNA
2. Generate a list of unique_transcripts based on transcript_sequences + priming_sites and add the list to the FASTA output file. mRNA -> cDNA
- TTTACGGT…
- CCATACGG…
......@@ -28,7 +28,7 @@ Simulating cDNA synthesis This is done by reverse transcribing starting from the
- CGGGGCG… 40
4. Iterate 1-3 and extend lists
5. Write unique_transcripts output file and copy_number_transcripts output file
5. Write unique_transcripts output FASTA file and copy_number_transcripts output CSV file
**Open questions:**
......
......