diff --git a/primingsitepredictor/postprocessing.py b/primingsitepredictor/postprocessing.py index 11687931ff27ddaf64682fd8655ff054ab2a6c7e..c37de930ad9604ebd7082cfaad6a1072df2ad5b8 100644 --- a/primingsitepredictor/postprocessing.py +++ b/primingsitepredictor/postprocessing.py @@ -60,7 +60,10 @@ class PostProcessRIBlast(): for index in self.interaction_df.index: self.output = self.output + str(self.interaction_df[3][index]+'\t' + 'RIBlast' + '\t' + 'Priming_site' + '\t' + self.interaction_df[13][index] + '\t' + self.interaction_df[12][index] + '\t' + '.' + '\t' + '+' + '\t' + '.' + '\t' + f'Interaction_Energy "{self.interaction_df["Normalised_interaction_energy"][index]}"' + '\n') - - return(self.output) + + with open('output_transcripts_df.txt', 'w') as f: + f.write(self.output) + + #print(PostProcessRIBlast().output) \ No newline at end of file