diff --git a/primingsitepredictor/postprocessing.py b/primingsitepredictor/postprocessing.py index c37de930ad9604ebd7082cfaad6a1072df2ad5b8..125950e493a8399cf4297eeb0778ca531325dc2a 100644 --- a/primingsitepredictor/postprocessing.py +++ b/primingsitepredictor/postprocessing.py @@ -60,10 +60,15 @@ class PostProcessRIBlast(): for index in self.interaction_df.index: self.output = self.output + str(self.interaction_df[3][index]+'\t' + 'RIBlast' + '\t' + 'Priming_site' + '\t' + self.interaction_df[13][index] + '\t' + self.interaction_df[12][index] + '\t' + '.' + '\t' + '+' + '\t' + '.' + '\t' + f'Interaction_Energy "{self.interaction_df["Normalised_interaction_energy"][index]}"' + '\n') +<<<<<<< HEAD with open('output_transcripts_df.txt', 'w') as f: f.write(self.output) +======= + + return(self.output) +>>>>>>> 9d8e928323a99c5e86557c4b53ab93aaf8f5beb5 #print(PostProcessRIBlast().output) \ No newline at end of file