From 00ac4a9abf1f6bfc274f3f79a292915b78761782 Mon Sep 17 00:00:00 2001
From: Christoph Harmel <christoph.harmel@unibas.ch>
Date: Fri, 9 Dec 2022 13:49:26 +0100
Subject: [PATCH] fix: CI
---
.gitlab-ci.yml | 6 ++++++
1 file changed, 6 insertions(+)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index e1a5ed1..aa3e97b 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -18,12 +18,18 @@ build-job: # This job runs in the build stage, which runs first.
unit-test-job: # This job runs in the test stage.
stage: test # It only starts when the job in the build stage completes successfully.
script:
+ - pip install -r requirements.txt
+ - pip install -r requirements-dev.txt
+ - pip install -e .
- coverage run --source readsequencer -m pytest
- coverage report -m
lint-test-job: # This job also runs in the test stage.
stage: test # It can run at the same time as unit-test-job (in parallel).
script:
+ - pip install -r requirements.txt
+ - pip install -r requirements-dev.txt
+ - pip install -e .
- flake8 --docstring-convention google readsequencer/ tests/
- pylint readsequencer/ tests/
--
GitLab