From ce6dbd48f3fa0eebedc17dba469198ae49960863 Mon Sep 17 00:00:00 2001
From: "hugo.madgeleon" <hugo.madgeleon@stud.unibas.ch>
Date: Mon, 12 Dec 2022 08:50:43 +0100
Subject: [PATCH] fix CI/CD
---
.gitlab-ci.yml | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 3606f77..93afcdd 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -11,14 +11,14 @@ build-job: # This job runs in the build stage, which runs first.
stage: build
script:
- pip install -r requirements.txt
- - pip install -r requirements-dev.txt
+ - pip install -r requirements_dev.txt
- pip install -e .
unit-test-job: # This job runs in the test stage.
stage: test # It only starts when the job in the build stage completes successfully.
script:
- pip install -r requirements.txt
- - pip install -r requirements-dev.txt
+ - pip install -r requirements_dev.txt
- pip install -e .
- coverage run --source term_frag_sel -m pytest
- coverage report -m
@@ -27,7 +27,7 @@ lint-test-job: # This job also runs in the test stage.
stage: test # It can run at the same time as unit-test-job (in parallel).
script:
- pip install -r requirements.txt
- - pip install -r requirements-dev.txt
+ - pip install -r requirements_dev.txt
- pip install -e .
#- flake8 --docstring-convention google readsequencer/ tests/
#- pylint readsequencer/ tests/
--
GitLab