diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 0ab9bf0dad086061ec39d07afc1712b11364e904..0c14af897919d1868659701b051ba43b9fccbfec 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -31,4 +31,4 @@ lint-test-job: # This job also runs in the test stage. - pip install -e . - flake8 --docstring-convention google term_frag_sel/ tests/ - pylint term_frag_sel/ tests/ - - mypy term_frag_sel/ + - mypy term_frag_sel/ tests/ diff --git a/setup.py b/setup.py index 3fe12debd8988acce22bf44e9f942c2051348894..469d7860fe839a60bd505a5719ae69f8be589ae3 100644 --- a/setup.py +++ b/setup.py @@ -1,6 +1,6 @@ """Set up project.""" from pathlib import Path -from setuptools import setup, find_packages +from setuptools import setup, find_packages # type: ignore project_root_dir = Path(__file__).parent.resolve() with open(project_root_dir / "requirements.txt", diff --git a/tests/test_frag.py b/tests/test_frag.py index da2d5bb0be820bfb92250c6fa581da98956eec60..90c0f948440c5cdbc1cc7126b67a5ec825665a96 100644 --- a/tests/test_frag.py +++ b/tests/test_frag.py @@ -1,7 +1,7 @@ """Test utils.py functions.""" -import pandas as pd +import pandas as pd # type: ignore import pytest -from Bio import SeqIO +from Bio import SeqIO # type: ignore from term_frag_sel.fragmentation import fragmentation