From f4092679d1f8dec30b02650ecca8e4b3785d40a1 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?M=C3=A1t=C3=A9=20Balajti?= <mate.balajti@unibas.ch>
Date: Mon, 18 Sep 2023 14:09:01 +0200
Subject: [PATCH] refactor: minor code updates
---
.gitlab-ci.yml | 2 +-
setup.py | 2 +-
tests/test_frag.py | 4 ++--
3 files changed, 4 insertions(+), 4 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 0ab9bf0..0c14af8 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -31,4 +31,4 @@ lint-test-job: # This job also runs in the test stage.
- pip install -e .
- flake8 --docstring-convention google term_frag_sel/ tests/
- pylint term_frag_sel/ tests/
- - mypy term_frag_sel/
+ - mypy term_frag_sel/ tests/
diff --git a/setup.py b/setup.py
index 3fe12de..469d786 100644
--- a/setup.py
+++ b/setup.py
@@ -1,6 +1,6 @@
"""Set up project."""
from pathlib import Path
-from setuptools import setup, find_packages
+from setuptools import setup, find_packages # type: ignore
project_root_dir = Path(__file__).parent.resolve()
with open(project_root_dir / "requirements.txt",
diff --git a/tests/test_frag.py b/tests/test_frag.py
index da2d5bb..90c0f94 100644
--- a/tests/test_frag.py
+++ b/tests/test_frag.py
@@ -1,7 +1,7 @@
"""Test utils.py functions."""
-import pandas as pd
+import pandas as pd # type: ignore
import pytest
-from Bio import SeqIO
+from Bio import SeqIO # type: ignore
from term_frag_sel.fragmentation import fragmentation
--
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