From 22146b8299f3dd3c5b734a5334f293afd93705dd Mon Sep 17 00:00:00 2001
From: Samuel Mondal <mondal0000@bz-rgab01-pdm02.bioz.unibas.ch>
Date: Tue, 13 Dec 2022 15:30:25 +0100
Subject: [PATCH] final changes to srtup.py
---
setup.py | 12 ++++++++++--
1 file changed, 10 insertions(+), 2 deletions(-)
diff --git a/setup.py b/setup.py
index b8e11c8..e6b45b5 100644
--- a/setup.py
+++ b/setup.py
@@ -1,13 +1,21 @@
from setuptools import setup, find_packages
+from pathlib import Path
+
+project_root_dir = Path(__file__).parent.resolve()
+
+with open(project_root_dir / "requirements.txt", "r", encoding="utf-8") as _file:
+ INSTALL_REQUIRES = _file.read().splitlines()
setup(
name='sequence_extractor',
author='Samuel Mondal',
+ author_email='samuel.mondal@unibas.ch',
url='https://git.scicore.unibas.ch/zavolan_group/tools/transcript-sequence-extractor',
license='MIT',
- version='0.2.0',
+ version='0.0.1',
+ description='Extracts transcript sequences from gtf file and adds polyA tail to the output sequence',
packages=find_packages(),
- install_requires=[],
+ install_requires=INSTALL_REQUIRES,
entrypoints={
'console_scripts': ['sequence_extractor=sequence_extractor.cli:main']
}
--
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