diff --git a/sequence_extractor/cli.py b/sequence_extractor/cli.py
index 5f01338d1326687db41cc7de7592f77d2d1d0fdd..2e05f55ac73667db5c6fdd575914314670282c52 100644
--- a/sequence_extractor/cli.py
+++ b/sequence_extractor/cli.py
@@ -1,9 +1,7 @@
 import argparse
 import logging
-from pre_bedtools import exon_extraction_from_gtf
 from exon_concatenation import exon_concatenation
-from polyA import polyA_addition_to_fasta_list
-from list_to_file import list_to_file
+from poly_a import poly_a_addition_to_fasta_list
 
 parser = argparse.ArgumentParser(
     prog = 'transcript_sequence_extractor',