diff --git a/sequence_extractor/cli.py b/sequence_extractor/cli.py index b3bfeab5176ae3fd05fae2475b28e2f72488e5a8..1fc4949133d15189bd19335e85b134aecd5bf897 100644 --- a/sequence_extractor/cli.py +++ b/sequence_extractor/cli.py @@ -1,4 +1,4 @@ -""" command line script to be run on output fasta file from bedtools getfasta """ +"""command line script to be run on output fasta file from bedtools getfasta.""" import argparse import logging from exon_concatenation import exon_concatenation diff --git a/sequence_extractor/poly_a.py b/sequence_extractor/poly_a.py index 476fb83b2918a3dcae2b734465f4d845384dcdcf..c1d8d9476d6ca0dee36155cc20342b697c165c68 100644 --- a/sequence_extractor/poly_a.py +++ b/sequence_extractor/poly_a.py @@ -1,9 +1,10 @@ """This script contains two functions and the first function is called by the second function and used to add poly A tail to the concatenated exon.""" -s + import numpy as np # To do: Taking probabilities of nucleotides from user and raising error if sum != 1 + def poly_a_generator( exon: str, ) -> str: