From 7cad209756858104027c4b3d01a9a0fab1c56e73 Mon Sep 17 00:00:00 2001
From: Samuel Mondal <samuel.mondal@unibas.ch>
Date: Wed, 14 Dec 2022 09:52:06 +0100
Subject: [PATCH] minor changes 2
---
sequence_extractor/cli.py | 2 +-
sequence_extractor/poly_a.py | 3 ++-
2 files changed, 3 insertions(+), 2 deletions(-)
diff --git a/sequence_extractor/cli.py b/sequence_extractor/cli.py
index b3bfeab..1fc4949 100644
--- a/sequence_extractor/cli.py
+++ b/sequence_extractor/cli.py
@@ -1,4 +1,4 @@
-""" command line script to be run on output fasta file from bedtools getfasta """
+"""command line script to be run on output fasta file from bedtools getfasta."""
import argparse
import logging
from exon_concatenation import exon_concatenation
diff --git a/sequence_extractor/poly_a.py b/sequence_extractor/poly_a.py
index 476fb83..c1d8d94 100644
--- a/sequence_extractor/poly_a.py
+++ b/sequence_extractor/poly_a.py
@@ -1,9 +1,10 @@
"""This script contains two functions and the first function is called by the second function and used to add poly A tail to the concatenated exon."""
-s
+
import numpy as np
# To do: Taking probabilities of nucleotides from user and raising error if sum != 1
+
def poly_a_generator(
exon: str,
) -> str:
--
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