From 83fc6e1af34c8b58d12fc6a81d56a24054bffafc Mon Sep 17 00:00:00 2001
From: Samuel Mondal <mondal0000@bz-rgab01-pdm02.bioz.unibas.ch>
Date: Mon, 28 Nov 2022 15:37:31 +0100
Subject: [PATCH] function name change

---
 sequence_extractor/polyA.py | 6 +++---
 tests/test_polyA.py         | 3 +++
 2 files changed, 6 insertions(+), 3 deletions(-)
 create mode 100644 tests/test_polyA.py

diff --git a/sequence_extractor/polyA.py b/sequence_extractor/polyA.py
index cafa91b..e50102f 100644
--- a/sequence_extractor/polyA.py
+++ b/sequence_extractor/polyA.py
@@ -1,6 +1,6 @@
 import numpy as np
 # To do: Taking probabilities of nucleotides from user and raising error if sum != 1
-def polyA_generator(
+def poly_a_generator(
 	exon: str,
 ) -> str:
 	"""Adds a PolyA tail to an exon sequence input into the function.
@@ -15,7 +15,7 @@ def polyA_generator(
 	polyA = ''.join(np.random.choice(listA,250,p=[0.9,0.040,0.020,0.020]))
 	return (exon+polyA)
 
-def polyA_addition_to_fasta_list(
+def poly_a_addition_to_fasta_list(
 	fasta_list: list,
 ) -> list:
 	"""Takes in a list of tuples with annotations and exons and outputs a list where polyA tail has been added to all the exon 3' ends.
@@ -26,5 +26,5 @@ def polyA_addition_to_fasta_list(
 	Returns:
 		A list like the initial list, this time with polyA tail added onto it.
 	"""
-	mature_rna_list = [(i[0],polyA_generator(i[1])) for i in fasta_list]
+	mature_rna_list = [(i[0],poly_a_generator(i[1])) for i in fasta_list]
 	return mature_rna_list
diff --git a/tests/test_polyA.py b/tests/test_polyA.py
new file mode 100644
index 0000000..ead1507
--- /dev/null
+++ b/tests/test_polyA.py
@@ -0,0 +1,3 @@
+import pytest
+
+from polyA import poly
-- 
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