From 703946be3bf6a5bc9fc80457ede911497812d374 Mon Sep 17 00:00:00 2001
From: Larissa Glass <larissa.glass@unibas.ch>
Date: Wed, 26 Oct 2022 16:04:41 +0200
Subject: [PATCH] environment setup

---
 README.md       | 10 +++++++++-
 environment.yml | 13 +++++++++++++
 2 files changed, 22 insertions(+), 1 deletion(-)
 create mode 100644 environment.yml

diff --git a/README.md b/README.md
index 9daeafb..3161d7a 100644
--- a/README.md
+++ b/README.md
@@ -1 +1,9 @@
-test
+# Setup
+
+To install the Python virtual environment, run
+
+```
+conda env create --file environment.yml
+conda activate transcript-structure-generator
+```
+
diff --git a/environment.yml b/environment.yml
new file mode 100644
index 0000000..2199378
--- /dev/null
+++ b/environment.yml
@@ -0,0 +1,13 @@
+name: transcript-structure-generator
+channels:
+  - defaults
+  - conda-forge
+dependencies:
+  - python=3.9
+  - matplotlib
+  - pandas
+  - flake8-docstrings
+  - mypy
+  - flake8
+  - pytest
+  - coverage
-- 
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