diff --git a/Dockerfile b/Dockerfile new file mode 100644 index 0000000000000000000000000000000000000000..be953d5d300c801bf87dfa3f915755f1e7e5ee5f --- /dev/null +++ b/Dockerfile @@ -0,0 +1,11 @@ +FROM python:3-slim + +WORKDIR /usr/src/app + +COPY README.md requirements.txt pyproject.toml ./ +ADD tsg ./tsg +ADD data ./data + +RUN pip install . + +CMD [ "transcript-generator", "--transcripts", "data/transcripts_short.csv", "--annotation", "data/Homo_sapiens.GRCh38.103.chr.gtf", "--prob_inclusion", "0.05" ] \ No newline at end of file