Commit 6408baf5 authored by BIOPZ-Schmidt Ralf's avatar BIOPZ-Schmidt Ralf

added pymongo package to requirements file of the py2 environment

parent 0e479784
......@@ -52,12 +52,12 @@ With the installation of the environment, the following software is installed as
#### Step 3: Creating a new python2 environment to run PAQR
PAQR relies on packages that are available only for python2 currently. To ensure that PAQR runs properly, this python2 environment is installed.
conda create -n py2_paqr python=2 -c bioconda --file requirements_py2.txt
conda create -n py2_paqr python=2 -c bioconda -c anaconda --file requirements_py2.txt
The following python packages are available in this python2 environment:
- [HTSeq] ( (v0.7.2)
- [RseQC] ( (2.6.4)
- [HTSeq]( (v0.7.2)
- [RseQC]( (v2.6.4)
#### Step 4: Activate the environment
(only the python3 environment needs to be activated; the py2_paqr environment is only used internally)
......@@ -3,3 +3,4 @@
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