Explore projects

Protein language model embedding based alignment (EBA) method

singularity definition files

xml input files for Beast, associated with manuscript: The Molecular Clock of Mycobacterium tuberculosis. DOI: https://doi.org/10.1371/journal.ppat.1008067

Analysis with exponential growth population prior, and 1/x prior on the clock rate

Pathways allows you to compute importance scores for a a list of metabolic pathways.

Phylogeography of Lineage 2 in Africa.

Very simple role to disable selinux and reboot the machine

PowerShell based collector of Citrix metrics for Prometheus (creating a textfile for the windows_exporter).

scripts and tools to evaluate monochrome cameras (for microscopy)

this is just an auxiliary repo to provide all scripts and auxiliary files that are part of the model pipeline

User-friendly command-line interface for the ZARP RNA-Seq analysis pipeline

package to correct CTF

Peptide identification and quantification from MS data.