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schwede / af2-at-scicore
MIT LicenseRun the AlphaFold2 pipeline on the sciCORE cluster... provided by the SWISS-MODEL team ;)
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TBRU / pathways
MIT LicensePathways allows you to compute importance scores for a a list of metabolic pathways.
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zavolan_group / pipelines / FragIt
Apache License 2.0Peptide identification and quantification from MS data.
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zavolan_group / tools / zarp-cli
Apache License 2.0User-friendly command-line interface for the ZARP RNA-Seq analysis pipeline
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this is just an auxiliary repo to provide all scripts and auxiliary files that are part of the model pipeline
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xml input files for Beast, associated with manuscript: The Molecular Clock of Mycobacterium tuberculosis. DOI: https://doi.org/10.1371/journal.ppat.1008067
Analysis with exponential growth population prior, and 1/x prior on the clock rate
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imcf / myosoft-imcf
GNU General Public License v3.0 onlyimcf-adaptation of Myosoft, a Fiji script that identifies muscle fibers in images of sections
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schwede / modelcif-converters
MIT LicenseTools/ code/ Dockerfiles... used to convert user projects into ModelCIF for upload to ModelArchive. Grown over time/ with every project.
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