Open-Source Computational Structural Biology Framework

TECtool is a method that uses mRNA and 3’ end sequencing data to identify novel terminal exons.

A Windows service doing automatic background file transfers to a UNC path with email reporting to users and error reporting to admins.

Django/REST back-end for the Krini project

ProMod3 - A Versatile Homology Modelling Toolbox

Angular front-end for the Krini project

Wrapper repository for the entire Krini project

QMEAN - Qualitative Model Energy ANalysis

An easy-to-use ImageJ macro for measuring SNR (signal-to-noise ratio) of light microscopes.

scripts, pipelines and documentation to run PAQR and KAPAC

KAPAC allows to infer regulatory sequence motifs implicated in 3’ end processing changes

PAQR enables the quantification of poly(A) site usage from standard RNA-seq data

ImageJ-macro to batch analyse all PSF images in a folder

Wrapper repository for the entire Krini project

singularity definition files

HTSinfer is a computational tool to infer meta-data from High Throughput Sequencing (HTS) data.

Material and data for the workshop in South Africa (2018)

☕ 🐍 🔬 Package for processing metadata from various light-microscopy related data formats.

Phylogeography of Lineage 2 in Africa.