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Open-Source Computational Structural Biology Framework
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The projects implements a simulation of single cell RNA sequencing (scRNA-seq), accounting for some common sources noise that complicate the analysis of the resulting data.
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A Windows service doing automatic background file transfers to a UNC path with email reporting to users and error reporting to admins.
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An easy-to-use ImageJ macro for measuring SNR (signal-to-noise ratio) of light microscopes.
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General purpose Snakemake RNA-seq analysis workflow
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Python tool to reduce size and redundancy of phylogenetic datasets
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Python script that can be used to compress a directory including all its files and subdirectories.
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zavolan_group / pipelines / Bind-n-Seq PWMs
Creative Commons Attribution Non Commercial 4.0 InternationalUpdated -
Metagenomics pipeline for human microbiome analysis with SnakeMake and singularity containers.
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ImageJ-macro to batch analyse all PSF images in a folder
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HTSinfer is a computational tool to infer meta-data from High Throughput Sequencing (HTS) data.
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This project contains all scripts and descriptions to enable the execution of a streamlined pipeline that processes A-seq2 read libraries up to the reporting of individual and clustered 3' end processing sites.
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