Open-Source Computational Structural Biology Framework

ProMod3 - A Versatile Homology Modelling Toolbox

A Windows service doing automatic background file transfers to a UNC path with email reporting to users and error reporting to admins.

QMEAN - Qualitative Model Energy ANalysis

An easy-to-use ImageJ macro for measuring SNR (signal-to-noise ratio) of light microscopes.

Python script that can be used to compress a directory including all its files and subdirectories.

This project contains all scripts and descriptions to enable the execution of a streamlined pipeline that processes A-seq2 read libraries up to the reporting of individual and clustered 3' end processing sites.

ImageJ-macro to batch analyse all PSF images in a folder

Copy of of the original IPLT repository

scripts, pipelines and documentation to run PAQR and KAPAC

KAPAC allows to infer regulatory sequence motifs implicated in 3’ end processing changes

PAQR enables the quantification of poly(A) site usage from standard RNA-seq data

package to correct CTF

Copy of of the original IPLT repository

Python tool to reduce size and redundancy of phylogenetic datasets

singularity definition files

Material and data for the workshop in South Africa (2018)

Wrapper repository for the entire Krini project

Phylogeography of Lineage 2 in Africa.

🐍 ☕ 🔩 🔧 A collection of commonly used Python helper functions.