Explore projects
-
Updated
-
-
TBRU / pathways
MIT LicensePathways allows you to compute importance scores for a a list of metabolic pathways.
Updated -
zavolan_public / PAQR_KAPAC
GNU General Public License v2.0 or laterscripts, pipelines and documentation to run PAQR and KAPAC
KAPAC allows to infer regulatory sequence motifs implicated in 3’ end processing changes
PAQR enables the quantification of poly(A) site usage from standard RNA-seq data
Updated -
Updated
-
-
Updated
-
imcf / noisee
GNU General Public License v3.0 onlyAn easy-to-use ImageJ macro for measuring SNR (signal-to-noise ratio) of light microscopes.
Updated -
imcf / myosoft-imcf
GNU General Public License v3.0 onlyimcf-adaptation of Myosoft, a Fiji script that identifies muscle fibers in images of sections
Updated -
schwede / modelcif-converters
MIT LicenseTools/ code/ Dockerfiles... used to convert user projects into ModelCIF for upload to ModelArchive. Grown over time/ with every project.
Updated -
schwede / Mobius
Apache License 2.0Mobius - A python package for peptide optimization using Bayesian optimization
Updated -
-
Jean-Guillaume Piccinali / Mirror Test
GNU General Public License v3.0 or laterUpdated -
TBRU / MetagenomicSnake
MIT LicenseMetagenomics pipeline for human microbiome analysis with SnakeMake and singularity containers.
Updated -
schwede / ma-wilkins-import
MIT LicenseTools to import models of the Wilkins group (Tara) to ModelArchive
Updated -
schwede / ligand-validation
Apache License 2.0Extract ligand and binding site information from PDB X-ray validation reports
Updated -
-
Updated
-
Comparative assessment of methods for the computational inference of transcript isoform from RNA-seq data. Submitted to Genome Biology (03-2015).
Updated -