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Generate gene and transcript count tables from salmon

Merged BIOPZ-Gypas Foivos requested to merge generate_gene_count_tables_from_salmon into master
  • Merged table of genes (TPM, counts) based salmon quantmerge
  • Merged table of transcripts (TPM, counts) based salmon quantmerge
  • Add pandas in install/environment.dev.yml

Fixes #51 (closed)

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