Alfa integration (!41) · Merge requests · zavolan_group / pipelines / ZARP · GitLab

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Merged Dominik Burri requested to merge alfa into master 5 years ago

Mar 12, 2020
- include test_alfa in CI · c79bb96e
  Dominik Burri authored 5 years ago
  
  c79bb96e
- added alfa_indexes to config.yaml · a7dddfe6
  Dominik Burri authored 5 years ago
  
  a7dddfe6
- replaced synthetic test by new one. · 46e6e00b
  Dominik Burri authored 5 years ago
  
  moved input_files into top-layer test directory for consistency. corrected removal of test files
  46e6e00b
- included tests for ALFA qc · ad3a8e52
  Dominik Burri authored 5 years ago
  
  corrected md5sum for config.yaml remove unnecessary file
  ad3a8e52
- added rule for · 37fb0fd0
  Dominik Burri authored 5 years ago
  
  - renaming bedgraph - creating ALFA qc plots removed conda dependence, moved import statement. included ALFA in finish rule, corrected annotation.gtf and config.yaml, created new .svg
  37fb0fd0