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zavolan_group / pipelines / scRNA-seq-simulation
MIT LicenseThe projects implements a simulation of single cell RNA sequencing (scRNA-seq), accounting for some common sources noise that complicate the analysis of the resulting data.
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schwede / ligand-validation
Apache License 2.0Extract ligand and binding site information from PDB X-ray validation reports
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schwede / Mobius
Apache License 2.0Mobius - A python package for peptide optimization using Bayesian optimization
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zavolan_group / pipelines / ZARP
Apache License 2.0General purpose Snakemake RNA-seq analysis workflow
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imcf / noisee
GNU General Public License v3.0 onlyAn easy-to-use ImageJ macro for measuring SNR (signal-to-noise ratio) of light microscopes.
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TBRU / TACOS
Apache License 2.0TACOS is a diverse Set Of Commands And Tools (SOCAT, but TACOS sounds much better!).
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TBRU / pathways
MIT LicensePathways allows you to compute importance scores for a a list of metabolic pathways.
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โ ๐ ๐ฌ Package for processing metadata from various light-microscopy related data formats.Updated -
imcf / python-imcflibs
GNU General Public License v3.0 only๐ โ ๐ฉ ๐ง A collection of commonly used Python helper functions.Topics: pythonArchived 0Updated -
Comparative assessment of methods for the computational inference of transcript isoform from RNA-seq data. Submitted to Genome Biology (03-2015).
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