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schwede / ma-wilkins-import
MIT LicenseTools to import models of the Wilkins group (Tara) to ModelArchive
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IMCF-public / Batch_PSF_analyser
GNU General Public License v3.0 onlyImageJ-macro to batch analyse all PSF images in a folder
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Jean-Guillaume Piccinali / SPH-EXA_mini-app
MIT LicenseUpdated -
☕ 🐍 🔬 Package for processing metadata from various light-microscopy related data formats.Updated -
zavolan_group / tools / ascii-alignment-pileup
Apache License 2.0Generates an ASCII-style pileup of read alignments in one or more BAM files against one or more regions specified in a BED file
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schwede / CASP15 Ligand Scoring
MIT LicenseUpdated -
Jean-Guillaume Piccinali / Mirror Test
GNU General Public License v3.0 or laterUpdated -
Fork of the cathsm-server repo (https://github.com/CATH-SWISSMODEL/cathsm-server) for the tutorial "Beyond the usual Docker tutorial - Web apps & CI" at [BC]^2 Conference 2021
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TBRU / Treemmer
GNU General Public License v3.0 or laterPython tool to reduce size and redundancy of phylogenetic datasets
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Django web framework workshop, Monday 29th June from 10:15 to 12:00 in the sky lounge.
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zavolan_public / PAQR_KAPAC
GNU General Public License v2.0 or laterscripts, pipelines and documentation to run PAQR and KAPAC
KAPAC allows to infer regulatory sequence motifs implicated in 3’ end processing changes
PAQR enables the quantification of poly(A) site usage from standard RNA-seq data
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TBRU / TACOS
Apache License 2.0TACOS is a diverse Set Of Commands And Tools (SOCAT, but TACOS sounds much better!).
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zavolan_group / tools / cDNA generator
MIT LicenseUpdated -
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Comparative assessment of methods for the computational inference of transcript isoform from RNA-seq data. Submitted to Genome Biology (03-2015).
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