Explore projects
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schwede / ligand-validation
Apache License 2.0Extract ligand and binding site information from PDB X-ray validation reports
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imcf / noisee
GNU General Public License v3.0 onlyAn easy-to-use ImageJ macro for measuring SNR (signal-to-noise ratio) of light microscopes.
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TBRU / Treemmer
GNU General Public License v3.0 or laterPython tool to reduce size and redundancy of phylogenetic datasets
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TBRU / pathways
MIT LicensePathways allows you to compute importance scores for a a list of metabolic pathways.
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zavolan_public / PAQR_KAPAC
GNU General Public License v2.0 or laterscripts, pipelines and documentation to run PAQR and KAPAC
KAPAC allows to infer regulatory sequence motifs implicated in 3’ end processing changes
PAQR enables the quantification of poly(A) site usage from standard RNA-seq data
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vamp / auto-tx
GNU General Public License v3.0 onlyA Windows service doing automatic background file transfers to a UNC path with email reporting to users and error reporting to admins.
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TBRU / MetagenomicSnake
MIT LicenseMetagenomics pipeline for human microbiome analysis with SnakeMake and singularity containers.
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Bienchen / iplt
GNU General Public License v3.0 onlyCopy of of the original IPLT repository
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IMCF-public / Batch_PSF_analyser
GNU General Public License v3.0 onlyImageJ-macro to batch analyse all PSF images in a folder
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This project contains all scripts and descriptions to enable the execution of a streamlined pipeline that processes A-seq2 read libraries up to the reporting of individual and clustered 3' end processing sites.
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Python script that can be used to compress a directory including all its files and subdirectories.
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