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Use minified docker images

Alex Kanitz requested to merge use_minified_docker_images into master

use images based on Dockerfiles generated with the following external PRs:

workflow now uses the following images:

  • zavolab/cutadapt:1.16-slim
  • zavolab/fastqc:0.11.9-slim (bumped from 0.11.8)
  • zavolab/gtf_transcript_type_to_bed12:0.1.0-slim
  • zavolab/kallisto:0.46.1-slim
  • zavolab/salmon:1.1.0-slim (bumped from 0.11.0)
  • zavolab/samtools:1.10-slim (bumped from 1.8)
  • zavolab/star:2.7.3a-slim (bumped from 2.6.0a)
  • zavolab/tin_score_calculation:0.1.0-slim

Total compressed size of images reduced from 2153.03 MB to 560.93 MB (3.8x smaller)

Closes #67 (closed)

Edited by Alex Kanitz

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