Merge kallisto
- Added new rules
kallisto_merge_genes
andkallisto_merge_transcripts
topipeline_documentation.md
andSnakefile
. - Both rules merge kallisto results for all samples with the same sequencing mode and generate separated summary tables for expression (TPM) and projected raw counts.
- Tables are merged with a custom R script (https://github.com/zavolanlab/merge_kallisto).
- Updated expected output files for the testing.
- Close issue #104 (closed)