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Merge kallisto

BIOPZ-Iborra de Toledo Paula requested to merge merge_kallisto into dev
  • Added new rules kallisto_merge_genesand kallisto_merge_transcriptsto pipeline_documentation.md and Snakefile.
  • Both rules merge kallisto results for all samples with the same sequencing mode and generate separated summary tables for expression (TPM) and projected raw counts.
  • Tables are merged with a custom R script (https://github.com/zavolanlab/merge_kallisto).
  • Updated expected output files for the testing.
  • Close issue #104 (closed)

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